Get your FREE Sourdough Starter Cheat Sheet → Subscribe now!

  • Nav Social Menu

    • Amazon
    • Facebook
    • Instagram
    • Pinterest
    • YouTube

The Clever Carrot

  • About
    • About The Clever Carrot
  • My Books
    • Artisan Sourdough
    • The Clever Cookbook
  • Bake Better Bread
  • Sourdough
    • Sourdough Bread Recipes
    • Sourdough Starters
    • Sourdough Discard Recipes
    • Sourdough Tips + Techniques
    • To Serve With Bread
  • Homemade Pasta
    • Fresh Homemade Pasta Recipes
    • Pasta Sauce
    • Homemade Gnocchi
    • Homemade Ravioli
  • Recipes
    • Sourdough Bread Recipes
    • Cookies, Cakes + Sweet Treats
    • Dinner Ideas
    • Pasta + Grains
    • Risotto
    • Side Dish
    • Salads
    • Soups
    • Snacks

Home » Recipes » Cookies, Cakes + Sweet Treats

soft whole-grain chocolate chip cookies

Cookies, Cakes + Sweet Treats

Leave a Review
19 comments
By Emilie Raffa — Updated June 9, 2020 — This post may contain affiliate links.
Jump to Recipe

soft whole-grain chocolate chip cookies | theclevercarrot.com

You know what’s really frustrating?

When you bake a batch of ‘soft’ chocolate chip cookies and they come out hard as a rock.

Like hockey pucks!

Has this ever happened to you?

I’m happy to report that this particular cookie recipe delivers on its claim; they’re soft, chewy, and retain their texture even on the second and third day.

And I suspect it has something to do with a very unusual ingredient…

soft whole-grain chocolate chip cookies | theclevercarrot.com

Vinegar!

Yes! The stuff you use to make salad dressing…

And no, these cookies do not taste like vinegar at all. Not even close.

Something magical happens when vinegar and baking soda join forces lending a tenderizing effect to cookies, doughs, and other baked goods. It’s like a culinary science experiment. In fact, we used to add cider vinegar to pastry dough back when I interned at a restaurant. It makes the crust incredibly flakey.

In addition to vinegar, the combination and amount of sugars (granulated, brown, honey) also contribute to the soft and chewy texture. You’ll see.

And one more thing worth noting- these cookies are made with 100% white whole wheat flour.

White whole wheat is made from bran lighter in color and more mild in flavor than traditional whole wheat flour. It also yields a smoother (as opposed to grainy) texture. This comes in handy when you’re trying to fool your little ones and/or significant other into eating a healthier cookie (no one has to know!).

And you can thank King Arthur for the recipe. I got it from them!

• • • • • • • • •

Kitchen Notes

Tips: FOLLOW THE RECIPE EXACTLY AS WRITTEN. If you do this, they will come out nice and soft.

Substitutions: Ok, so ignoring my own advice (above) I made a few minor swaps based on what I had in the house. They all worked, that’s why I’m mentioning it here. I did however, follow the mixing order and baking directions exactly as written. This is key.

The original recipe calls for cider vinegar. I didn’t have any, so I used white vinegar instead. It worked! If you are making this for the first time, I do recommend using cider vinegar, but in a pinch, do what I did. DO NOT under any circumstance use red-wine vinegar or balsamic ;)

Also, the original recipe calls for espresso powder. I left that out because: kids. You’ll also notice a range in chocolate chips ( 2 2/3- 3 cups). We all agreed that 2 2/3 cups was the way to go.

Make-Ahead: These cookies can be made up to 2 days in advance and still remain soft. By the third day, they are really soft.

Also, you could freeze the dough in 1-inch balls (use a mini ice cream scoop) on a parchment lined baking sheet. Transfer to a ziploc bag when frozen. I haven’t tested the amount of time needed to bake these cookies, but from frozen, I would bake until just underdone (similar to when baking fresh). Just keep your eye on them.

By signing up, you agree to receive emails from The Clever Carrot. Unsubscribe at any time.

clock clock iconcutlery cutlery iconflag flag iconfolder folder iconinstagram instagram iconpinterest pinterest iconfacebook facebook iconprint print iconsquares squares iconheart heart iconheart solid heart solid icon

soft whole-grain chocolate chip cookies

5 Stars 4 Stars 3 Stars 2 Stars 1 Star No reviews
  • Author: Emilie Raffa adapted from King Arthur Flour
  • Yield: 40 cookies 1x
Print Recipe
Pin Recipe

Ingredients

  • 6 tablespoons unsalted butter, softened
  • 1/3 cup granulated sugar
  • 1/2 cup brown sugar, lightly packed
  • 3 tablespoons runny honey
  • 2 teaspoons vanilla extract
  • 1/2 teaspoon espresso powder (I omitted this for the kids)
  • 1/2 teaspoon butterscotch or butter-rum flavor, optional (I didn’t use this)
  • 3/4 teaspoon salt
  • 1 tablespoon cider vinegar (I used white vinegar)
  • 1 large egg
  • 1/2 teaspoon baking soda
  • 1/2 teaspoon baking powder
  • 2 cups white whole wheat flour*
  • 2 2/3 to 3 cups semisweet chocolate chips (I preferred the taste of 2 2/3 cups)

*White whole wheat is made from bran that is lighter in color and more mild in flavor than traditional whole wheat flour.


Instructions

  1. Preheat your oven to 350°F. Line 2 rimmed baking sheets with parchment paper.
  2. In a large bowl or using an electric stand mixer, beat together the butter, sugars, honey, vanilla, and salt until smooth.
  3. Mix in the vinegar, egg, baking soda, and baking powder.
  4. Add the flour, a little bit at a time, followed by the chocolate chips. Mix until just combined.
  5. Portion the dough using a mini 1-inch ice cream scoop (or a tablespoon) onto your lined baking sheets.
  6. Bake for 10 to 11 minutes until the cookies are barely starting to brown. They might look too light in color and underdone, but this is what you want. If you over bake them, they won’t be soft. Note: if you’re using a darker cookie sheet without parchment, bake for a shorter period of time.
  7. When finished, remove the cookies from the oven. Cool on the tray for 10 minutes.
  8. Transfer to a wire rack to finish cooling.

Did you make this recipe?

Share a photo and tag us — we can't wait to see what you've made!

 

Filed Under: Cookies, Cakes + Sweet Treats

19 Comments

Previous Post: « How To Make a Brioche Loaf
Next Post: the clever cookbook is here + giveaway! »

Reader Interactions

Artisan Sourdough Made Simple |theclevercarrot.com

Artisan Sourdough Made Simple

A beginner’s guide to delicious hand-crafted bread with minimal kneading.

Buy now

    Leave a Comment & Star Rating Cancel reply

    Did you find this post helpful? By leaving a star rating and review, it will help others find my recipes and tutorials too. As always, thanks for your support! —Emilie

    Your email address will not be published. Required fields are marked *

    Recipe rating 5 Stars 4 Stars 3 Stars 2 Stars 1 Star

    Comments

  1. Gretchen says

    February 28, 2016 at 11:28 am

    I will definitely experiment with the vinegar. Lately I’ve been using spelt flour in my chocolate chip cookies. The results are delicious and even hubby and the boys liked them! White whole wheat used to be my go to, now it’s more spelt though.

    Reply
  2. Rachel Joy says

    February 25, 2016 at 11:04 am

    I was wondering if you think that Whole Wheat Pastry Flour would be ok here instead of the white whole wheat flour? Thanks to Heidi over at 101 Cookbooks I use whole wheat pastry flour in so many recipes as a sub for AP flour and generally I haven’t had any problems!

    Reply
    • Emilie says

      February 25, 2016 at 6:33 pm

      Hi there!

      You know, I’ve never tried it with ww pastry flour, but I don’t see there being a problem. I say go for it! Let me know how it goes! x

      Reply
  3. Fallon Graham says

    February 23, 2016 at 6:49 am

    I have never tried whole wheat flour in cookies but I have wanted to. I was afraid they would come out tough. I am definitely going to try this recipe! They looks and sound amazing!!

    Reply
    • Emilie says

      February 23, 2016 at 9:56 am

      Hello Fallon!

      What’s nice about this recipe is that the cookies are made with white whole wheat flour (as opposed to whole wheat flour) which makes them not as grainy. The combination of sugars, plus the vinegar, help with the softness too. It’s the perfect storm of ingredients! Hope you enjoy the recipe ;)

      Reply
  4. Pamela Green says

    February 17, 2016 at 12:04 am

    Wow, vinegar?! Never heard of using it and now I’m going to have to try it! I love that you used whole-wheat flour too because I’m trying to lessen white flour in my diet. A great recipe as always!

    Reply
  5. Laney (Ortensia Blu) says

    February 16, 2016 at 8:36 am

    Wow, never knew that about the vinegar – I always learn something new from you Emilie! And with whole wheat flour and honey these are healthy CCCs, right?

    Reply
  6. Kathryn @ The Scratch Artist says

    February 14, 2016 at 3:04 pm

    I love this tip AND I also love hard cookies. I know, weird. I actually quite prefer a burnt cookie, which I know is a distinction from a hard cookie. But that Famous Amos crunchy, hard cookie texture is my thang. Happy Valentine’s Day <3

    Reply
  7. CB says

    February 12, 2016 at 10:04 pm

    Excellent recipe choice! This KAF recipe has been a top drawer favorite in our house for a number of years. First, the recipe is straightforward, and when it is followed precisely, the cookies are simply fabulous. Second, and more important to a “recipe tinkerer” like me, this recipe is incredibly forgiving and accommodating of experimentation.
    For example, I have added peanut butter in place of the honey & butterscotch, and in greater quantity, resulting in a scrumptious PB-chocolate chocolate chip cookie. For a more intense chocolate flavor, I have made these with Dutch process cocoa, and I have also made them with Nutella in place of the honey for a delightful European chocolate-hazelnut flavor. All the variations and permutations which I have tried have worked out very well. The only ‘problem’ which I have encountered is trying to get all those chips to stay in the cookie dough. At about 2 ½ cups my dough is pretty maxed out. More chips than that and they start to fall out of the dough. I also use the cookie scoop method to portion out the dough on parchment paper, and that works exceptionally well. I would only suggest that anyone new to this recipe follow it closely for the first time or two before experimenting.

    Reply
  8. Laura (Tutti Dolci) says

    February 12, 2016 at 8:30 pm

    I’m all about a soft chocolate chip cookie and that vinegar tip is new to me, so now I need to whip up a batch this weekend :).

    Reply
  9. Mary Ann | The Beach House Kitchen says

    February 12, 2016 at 4:32 pm

    Wow, what an awesome tip Emilie! Thanks so much for sharing! These look wonderful!

    Reply
  10. linda \\ the baker who kerns says

    February 12, 2016 at 4:32 pm

    Oh my goodness I have gotten hockey pucks before! Not only is it frustrating but it’s kind of embarrassing when you were the one assigned to make chocolate chip cookies for your company potluck. I love that tip! Who would have know that it was vinegar. I will definitely be using that next time now doubt! These cookies look yummy!

    Reply
  11. Megan S. says

    February 12, 2016 at 2:08 pm

    Very cool about the vinegar. I’ve used it in pastry crust but not in cookies. I’ll have to try it out!

    Reply
  12. Aysegul says

    February 12, 2016 at 1:27 pm

    This is exactly why I love reading this blog. I learn so much. Seriously, I knew that vinegar is magical but not to this extend.
    I’ll have to try these very soon. Thank you, my friend. <3

    Reply
  13. Katrina says

    February 12, 2016 at 1:21 pm

    I love the idea of making whole grain chocolate chip cookies. These sound wonderful!

    Reply
  14. Kristina says

    February 12, 2016 at 12:15 pm

    Hi!

    Your blog is so lovely and colorful! It’s a pleasure to read it.
    Good luck!

    Reply
  15. Traci | Vanilla And Bean says

    February 12, 2016 at 11:43 am

    Haahaa… like hockey pucks! YES! When I was in pastry school, my class of 5 spent an entire day testing variations of pie dough. Hands down, the vinegar pie crust won. To this day, I still put ACV in my pie dough. It’s magic. It tenderizes everything! Now, I’ve not tried it in cookies… HELLO!?! This is why you are the Clever Carrot, see! You know I adore white whole wheat and can just imagine how delicious this is with all that melty chocolate… so good my dear! Looking forward to this! Have a lovely weekend! xo

    Reply
  16. Alice @ Hip Foodie Mom says

    February 12, 2016 at 11:16 am

    I’m so intrigued by the vinegar!!! these cookies look amazing!!!

    Reply
  17. Adri says

    February 12, 2016 at 11:00 am

    These cookies sound great – and that is something coming from a dyed in the wool crisp cookie aficionado! I have always marveled at the tenderizing effect of vinegar. My Hungarian grandmother (as opposed to my Italian grandmother) used to add white vinegar to her pie crust rather than water, and her crust really was superb. So indeed there is something to it.

    I am also quite a fan of KAF White Whole Wheat Flour. To be frank, I find KAF Whole Wheat Flour to be almost overpowering in its whole wheat flavor. Don’t get me wrong, I like it, but it really has the most “whole wheaty” taste on the market, so I find their white version quite agreeable.

    I hope things are going well for you, these cookies make life seem sweet indeed.

    Reply

Primary Sidebar

Meet Emilie

Hi! I’m Emilie, author of the best selling book: Artisan Sourdough Made Simple. I’m a bread baker, pasta maker, and head over heels for old world Italian recipes. Let’s cook together! More here: about Emilie.

Get the book

Artisan Sourdough Cookbook

Buy Now

Let’s Connect

  • Facebook
  • Instagram
  • Pinterest
  • Twitter

Popular Now

Soft Sourdough Cinnamon Rolls
Tray of baked sourdough bagels
A white bowl of chunky homemade breadcrumbs

Popular Sourdough Recipes

  • Sourdough starter
  • Sourdough bread
  • Sourdough focaccia bread
  • Sourdough pancakes
  • Sourdough pizza crust
  • Sourdough bagels
  • Sourdough cinnamon rolls
  • Sourdough sandwich bread
  • Sourdough pasta

Sourdough Tips + Techniques

  • How to feed sourdough starter
  • What sourdough starter container to use
  • Sourdough starter troubleshooting
  • How to stretch and fold sourdough
  • How to shape a round sourdough boule
  • What to do with sourdough discard
  • Sourdough bread fillings
  • My book, Artisan Sourdough Made Simple

Dinner Pastas & Sauces

  • How to make fresh pasta dough
  • Homemade ravioli
  • Arriabbiata sauce
  • Alfredo sauce
  • Pasta carbonara
  • Ragu bolognese sauce
  • Pomodoro sauce

Seasonal Staples

  • Brioche burger buns
  • Brioche rolls
  • Apple crumble
  • Butternut squash ravioli
  • Classic lasagna
  • Italian anise biscotti
  • Shortbread cookies

  • Privacy Policy
© 2026 Artful Spoon LLC + Design by Tara Hurst + Support by Foodie Digital